STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_010653PCI domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (698 aa)    
Predicted Functional Partners:
EWB00_010969
26 proteasome complex subunit DSS1 isoform 3.
    
 
 0.975
EWB00_008373
Germinal-center associated nuclear.
   
 
 0.968
EWB00_005656
Leukocyte receptor cluster member 8 isoform 1.
   
 
 0.945
EWB00_004655
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 
 0.932
EWB00_002649
Caltractin.
    
 
 0.729
EWB00_001301
Centrin-3 isoform 5.
    
 
 0.729
EWB00_008894
Centrin-2 isoform 1.
    
 
 0.729
EWB00_000074
Nuclear RNA export factor 1.
    
 
 0.690
Hel25E
Spliceosome RNA helicase Ddx39b.
   
 
 0.624
EWB00_002457
mRNA export factor.
   
  
 0.607
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.