STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWB00_005984Lysine-specific histone demethylase 1. (691 aa)    
Predicted Functional Partners:
EWB00_000045
AT-rich interactive domain-containing protein.
   
 
 0.970
EWB00_006345
REST corepressor 1.
    
 0.846
EWB00_003325
REST corepressor isoform 2.
    
 0.846
EWB00_000068
Histone H3; Belongs to the histone H3 family.
    
 0.815
EWB00_004500
Histone H3-like centromeric protein.
    
 0.815
EWB00_006291
Histone H3; Belongs to the histone H3 family.
    
 0.815
EWB00_006829
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.814
EWB00_001756
Histone deacetylase 8.
    
 0.814
EWB00_001492
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.814
EWB00_011245
Histone H2B; Belongs to the histone H2B family.
    
 0.784
Your Current Organism:
Schistosoma japonicum
NCBI taxonomy Id: 6182
Other names: S. japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.