STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q0KFF6Putative ubiquitin (Ribosomal protein L40). (609 aa)    
Predicted Functional Partners:
A0A5K4F2E5
Uncharacterized protein.
   
 0.972
A0A5K4FBD9
Uncharacterized protein.
   
 0.963
A0A5K4FCQ9
Uncharacterized protein.
   
 0.963
A0A5K4F1B5
Uncharacterized protein.
    
 0.954
Smp_089430
Ubiquitin (Ribosomal protein L40), putative.
   
0.950
A0A3Q0KIJ7
Uncharacterized protein.
   
 0.940
Smp_083710
Uncharacterized protein.
   
 0.940
A0A3Q0KNZ0
Putative rab GDP/GTP exchange factor.
   
 0.933
A0A3Q0KRK3
Putative ubiquitin-activating enzyme e1.
   
 0.928
Smp_083400
Ubiquitin conjugating enzyme 13, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.920
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.