STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q0KHQ6Putative tata-box binding protein. (138 aa)    
Predicted Functional Partners:
A0A5K4EGG5
Putative transcription initiation factor IIB (TFIIB).
   
 0.913
A0A3Q0KGP2
Transcription initiation factor tfiid, putative.
   
 0.904
Smp_211170
Alpha(1,3)fucosyltransferase,putative.
    
 0.903
A0A3Q0KSV8
Transcription initiation factor tfiid 55 kD subunit-related.
    
 0.902
A0A3Q0KIB0
Putative tfiia large subunit.
   
 0.893
A0A3Q0KVC9
Serine/threonine kinase.
   
 0.893
Smp_134790
Transcription initiation factor iid, 28 kD subunit-related.
   
 0.892
A0A3Q0KFW9
Putative poly(P)/ATP NAD kinase.
    
 0.891
Smp_088460
Putative tfiif-alpha.
    
 0.878
Smp_198520
Uncharacterized protein.
    
 0.878
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.