STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q0KSA4DUF3421 domain-containing protein. (155 aa)    
Predicted Functional Partners:
Smp_028340
Brix domain containing protein, putative.
   
 
 0.605
Smp_058680.2
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.524
A0A5K4F1G4
Peter pan-related.
   
    0.499
A0A5K4FC15
Uncharacterized protein.
    
 
 0.495
A0A5K4EB83
Putative wd-repeat protein.
   
  
 0.425
Smp_022660
Putative wd-repeat protein.
   
  
 0.425
Smp_029750
Uncharacterized protein.
   
  
 0.406
A0A3Q0KPU0
Proliferation-associated protein 2G4, 38kDa (M24 family).
   
  
 0.400
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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