STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q0KU09DNA double-strand break repair rad50 ATPase,putative. (817 aa)    
Predicted Functional Partners:
A0A5K4FBD9
Uncharacterized protein.
   
 0.728
A0A5K4FCQ9
Uncharacterized protein.
   
 0.728
Smp_079430.2
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.686
Smp_166310
Putative ran gtpase-activating protein.
   
 0.682
A0A3Q0KBF9
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.644
A0A3Q0KSJ9
Putative nuclear pore complex protein nup155.
   
 0.637
Smp_103710
Putative ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.636
A0A5K4F9L9
Putative wd-repeat protein.
    
 0.633
A0A5K4F4P5
Uncharacterized protein.
   
 0.631
Smp_060180
Nucleoporin seh1 (Sec13-like protein); Belongs to the WD repeat SEC13 family.
    
 0.631
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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