STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q0KUH8Coatomer delta subunit, putative. (290 aa)    
Predicted Functional Partners:
A0A3Q0KMM4
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.997
A0A5K4EZI5
Uncharacterized protein.
   
 0.997
Smp_104860
Ribonuclease p-related.
   
 0.997
Smp_104660
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.960
Smp_064800.1
Alba domain-containing protein.
    
 0.959
A0A5K4FDK2
Uncharacterized protein.
   
 
 0.794
A0A5K4EZQ5
Uncharacterized protein.
   
   0.759
A0A5K4F0N8
Uncharacterized protein.
   
   0.759
A0A5K4F117
Uncharacterized protein.
   
   0.759
A0A3Q0KIA7
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
    0.662
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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