STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5K4E9H2Uncharacterized protein. (342 aa)    
Predicted Functional Partners:
A0A3Q0KLN6
Ge1_WD40 domain-containing protein.
    
 0.955
A0A3Q0KVF3
DEAD box ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family.
    
 0.948
A0A3Q0KRZ0
Dcp1 related.
    
 0.918
A0A5K4EWR5
Dcp1 related.
    
 0.918
A0A3Q0KN19
Uncharacterized protein.
  
 0.907
LSM1
U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.
    
 0.866
A0A5K4FDZ0
Uncharacterized protein.
    
 
 0.864
A0A3Q0KN92
5'-3' exoribonuclease, putative.
   
 0.840
A0A5K4EPZ7
5'-3' exoribonuclease, putative.
   
 0.840
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.808
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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