A0A5K4END4 protein (Schistosoma mansoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5K4END4

Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2). (966 aa)

Predicted Functional Partners:

A0A3Q0KSZ4

0.500

A0A5K4FEW8

0.500

A0A5K4FC44

0.461

A0A3Q0KP62

0.437

A0A3Q0KPA6

0.437

A0A3Q0KLM1

0.434

Your Current Organism:

Schistosoma mansoni

NCBI taxonomy Id: 6183
Other names: S. mansoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3Q0KLM1	A0A5K4END4	Putative multidrug resistance protein 1 (ATP-binding cassette C1).	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	0.434
A0A3Q0KP62	A0A5K4END4	Putative multidrug resistance associated protein.	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	0.437
A0A3Q0KPA6	A0A5K4END4	Putative multidrug resistance associated protein.	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	0.437
A0A3Q0KSZ4	A0A5K4END4	Putative multidrug resistance protein 1 (ATP-binding cassette C1).	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	0.500
A0A5K4END4	A0A3Q0KLM1	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	Putative multidrug resistance protein 1 (ATP-binding cassette C1).	0.434
A0A5K4END4	A0A3Q0KP62	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	Putative multidrug resistance associated protein.	0.437
A0A5K4END4	A0A3Q0KPA6	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	Putative multidrug resistance associated protein.	0.437
A0A5K4END4	A0A3Q0KSZ4	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	Putative multidrug resistance protein 1 (ATP-binding cassette C1).	0.500
A0A5K4END4	A0A5K4FC44	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	Uncharacterized protein.	0.461
A0A5K4END4	A0A5K4FEW8	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	Uncharacterized protein.	0.500
A0A5K4FC44	A0A5K4END4	Uncharacterized protein.	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	0.461
A0A5K4FEW8	A0A5K4END4	Uncharacterized protein.	Putative atp-binding cassette, sub-family g2 (White protein) (Abcg2).	0.500