STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5K4ETA2Putative yeast nucleolar complex. (604 aa)    
Predicted Functional Partners:
A0A3Q0KLY4
Ccaat-binding factor-related.
   
 
 0.994
A0A3Q0KG54
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.990
A0A3Q0KI50
RRM domain-containing protein.
   
 
 0.990
A0A3Q0KM33
Uncharacterized protein.
   
 
 0.990
A0A3Q0KK53
Putative programmed cell death protein 11 (Pre-rRNA processing protein rrp5).
   
 
 0.986
Smp_028340
Brix domain containing protein, putative.
   
 
 0.986
Smp_094020
RNA helicase.
   
 
 0.985
A0A3Q0KM68
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.984
A0A5K4FEC5
Uncharacterized protein.
   
 
 0.983
A0A5K4EZT6
Uncharacterized protein.
   
 
 0.980
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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