STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5K4F365Uncharacterized protein. (662 aa)    
Predicted Functional Partners:
A0A3Q0KBM9
Putative splicing factor 3a.
   
 0.963
A0A5K4FAS4
Uncharacterized protein.
   
 0.954
A0A3Q0KHW9
Matrin-type domain-containing protein.
   
 0.952
Smp_067420
Splicing factor 3b, subunit 4,putative.
   
 0.937
Smp_141330
Uncharacterized protein.
   
 0.926
Smp_011720
Uncharacterized protein.
   
 0.924
A0A3Q0KMI8
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
    
 0.916
A0A3Q0KUZ7
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.902
A0A3Q0KNF4
Splicing factor 3b, subunit 1-related.
   
 0.901
A0A3Q0KNI0
Splicing factor 3b, subunit 1-related.
   
 0.901
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.