A0A5K4FB93 protein (Schistosoma mansoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5K4FB93

Uncharacterized protein. (548 aa)

Predicted Functional Partners:

Smp_175210

0.816

KATNAL2

0.464

A0A5K4F373

0.457

Smp_143060

0.449

A0A3Q0KDP0

0.446

A0A3Q0KK68

0.446

A0A3Q0KKW0

0.446

A0A3Q0KMM5

0.446

A0A3Q0KPX0

0.446

A0A5K4F0V2

0.446

Your Current Organism:

Schistosoma mansoni

NCBI taxonomy Id: 6183
Other names: S. mansoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q0KDP0	A0A5K4FB93	A0A3Q0KDP0	A0A5K4FB93	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A3Q0KK68	A0A5K4FB93	A0A3Q0KK68	A0A5K4FB93	Family S9 non-peptidase homologue (S09 family).	Uncharacterized protein.	0.446
A0A3Q0KKW0	A0A5K4FB93	A0A3Q0KKW0	A0A5K4FB93	BC026374 protein (S09 family); Belongs to the type-B carboxylesterase/lipase family.	Uncharacterized protein.	0.446
A0A3Q0KMM5	A0A5K4FB93	A0A3Q0KMM5	A0A5K4FB93	Family S9 non-peptidase homologue (S09 family).	Uncharacterized protein.	0.446
A0A3Q0KPX0	A0A5K4F373	A0A3Q0KPX0	A0A5K4F373	Family S60 non-peptidase homologue (S60 family).	Uncharacterized protein.	0.464
A0A3Q0KPX0	A0A5K4FB93	A0A3Q0KPX0	A0A5K4FB93	Family S60 non-peptidase homologue (S60 family).	Uncharacterized protein.	0.446
A0A5K4F0V2	A0A5K4FB93	A0A5K4F0V2	A0A5K4FB93	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A5K4F373	A0A3Q0KPX0	A0A5K4F373	A0A3Q0KPX0	Uncharacterized protein.	Family S60 non-peptidase homologue (S60 family).	0.464
A0A5K4F373	A0A5K4FB93	A0A5K4F373	A0A5K4FB93	Uncharacterized protein.	Uncharacterized protein.	0.457
A0A5K4FB93	A0A3Q0KDP0	A0A5K4FB93	A0A3Q0KDP0	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A5K4FB93	A0A3Q0KK68	A0A5K4FB93	A0A3Q0KK68	Uncharacterized protein.	Family S9 non-peptidase homologue (S09 family).	0.446
A0A5K4FB93	A0A3Q0KKW0	A0A5K4FB93	A0A3Q0KKW0	Uncharacterized protein.	BC026374 protein (S09 family); Belongs to the type-B carboxylesterase/lipase family.	0.446
A0A5K4FB93	A0A3Q0KMM5	A0A5K4FB93	A0A3Q0KMM5	Uncharacterized protein.	Family S9 non-peptidase homologue (S09 family).	0.446
A0A5K4FB93	A0A3Q0KPX0	A0A5K4FB93	A0A3Q0KPX0	Uncharacterized protein.	Family S60 non-peptidase homologue (S60 family).	0.446
A0A5K4FB93	A0A5K4F0V2	A0A5K4FB93	A0A5K4F0V2	Uncharacterized protein.	Uncharacterized protein.	0.446
A0A5K4FB93	A0A5K4F373	A0A5K4FB93	A0A5K4F373	Uncharacterized protein.	Uncharacterized protein.	0.457
A0A5K4FB93	KATNAL2	A0A5K4FB93	A0A3Q0KNA7	Uncharacterized protein.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.464
A0A5K4FB93	Smp_143060	A0A5K4FB93	G4VTG6	Uncharacterized protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.449
A0A5K4FB93	Smp_175210	A0A5K4FB93	G4VJD9	Uncharacterized protein.	Enhancer of rudimentary homolog; May have a role in the cell cycle.	0.816
KATNAL2	A0A5K4FB93	A0A3Q0KNA7	A0A5K4FB93	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Uncharacterized protein.	0.464