STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBDMethyl-cpg binding protein, mbd, putative. (314 aa)    
Predicted Functional Partners:
A0A3Q0KVE1
Putative retinoblastoma-binding protein 4 (Rbbp4).
   
 0.980
A0A3Q0KIA2
Putative chromodomain helicase DNA binding protein.
   
 0.974
A0A5K4F3B7
Uncharacterized protein.
   
 0.950
Smp_005210
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.935
HDAC3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.934
A0A5K4FA34
Uncharacterized protein.
    
 0.921
A0A5K4FAU4
Uncharacterized protein.
    
 0.921
A0A5K4FEJ5
Uncharacterized protein.
    
 0.921
A0A3Q0KJ63
Putative histone deacetylase 1, 2,3.
    
 0.913
A0A3Q0KHB6
Putative retinoblastoma-binding protein 4 (Rbbp4).
    
 0.888
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.