STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_022130Rab-GAP TBC domain-containing protein. (438 aa)    
Predicted Functional Partners:
A0A5K4FFJ3
Uncharacterized protein.
    
   0.718
A0A3Q0KV72
Putative rab15, 13, 10, 1, 35, 5, and.
    
 
 0.691
A0A5K4F5R0
Uncharacterized protein.
   
  
 0.555
Smp_194930
TBC1 domain family.
   
 
 0.540
A0A3Q0KDJ2
Putative tbc1 domain family member.
    
 
 0.502
Smp_057320
Putative vesicular-fusion protein nsf.
   
  
 0.487
A0A5K4F8E7
Uncharacterized protein.
   
 
 0.474
A0A5K4FF22
Uncharacterized protein.
    
 
 0.468
A0A3Q0KGK8
Putative soluble NSF attachment protein (SNAP).
   
 
 0.466
A0A3Q0KGS5
Uncharacterized protein.
   
 
 0.460
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.