STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_041570Uncharacterized protein. (410 aa)    
Predicted Functional Partners:
Smp_058190
Putative dna double-strand break repair rad50 ATPase.
   
  
 0.632
A0A5K4FDX6
Uncharacterized protein.
      
 0.617
A0A5K4EI11
Uncharacterized protein.
   
    0.560
Smp_087560
NYD-SP28 domain-containing protein.
   
    0.560
Smp_103810.1
Uncharacterized protein.
      
 0.485
A0A5K4FB65
Uncharacterized protein.
      
 0.447
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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