STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_072370Putative tpr repeat nuclear phosphoprotein. (1091 aa)    
Predicted Functional Partners:
A0A3Q0KSZ7
Senescence downregulated leo1-like.
   
 0.999
A0A5K4F1R0
Uncharacterized protein.
   
 0.999
A0A5K4FBZ1
Uncharacterized protein.
   
 0.999
A0A3Q0KPJ4
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
 0.997
Smp_161170
Plus3 domain-containing protein.
   
 0.996
A0A3Q0KQP2
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.981
A0A5K4FGM0
Uncharacterized protein.
   
 0.977
A0A3Q0KPW2
Putative suppressor of ty.
   
 0.976
A0A5K4F3N8
Uncharacterized protein.
   
 0.968
A0A5K4F445
Uncharacterized protein.
   
 0.968
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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