STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_091360Mago-bind domain-containing protein. (209 aa)    
Predicted Functional Partners:
Smp_002550.2
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.999
Smp_103470.1
Mago nashi protein homolog.
    
 
 0.990
A0A5K4FBX9
Uncharacterized protein.
      
 0.683
A0A3Q0KNX7
DNAj-related.
      
 0.630
A0A3Q0KHL1
SPFH domain / Band 7 family protein, putative.
   
  
 0.607
Smp_034190.1
Putative dead box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 
 0.586
A0A3Q0KQJ0
Uncharacterized protein.
      
 0.562
Smp_031010
Putative dead box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
    
 
 0.556
A0A3Q0KJU1
Upf3 regulator of nonsense transcripts-like protein.
   
 
 0.487
Smp_125540
Uncharacterized protein.
    
 
 0.486
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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