STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_047360.1Ubx6(Yeast)-related. (305 aa)    
Predicted Functional Partners:
A0A5K4F1B5
Uncharacterized protein.
   
 
 0.992
Smp_018240.3
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.990
Smp_060010
Putative ubx domain containing protein.
   
 0.951
A0A3Q0KD47
UBX domain-containing protein.
   
 0.946
A0A3Q0KDE0
Putative ubx domain-containing.
   
 
0.923
A0A3Q0KUD3
Putative small VCP/p97-interacting protein.
     
  0.900
A0A3Q0KIH6
Putative aaa family ATPase.
   
 0.861
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.842
Smp_084610
Fas-associated factor-related.
   
 
 0.834
A0A3Q0KKY7
Putative scythe/bat3.
    
 
 0.804
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.