Smp_078800 protein (Schistosoma mansoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Smp_078800

Putative dnaj homolog subfamily B member. (192 aa)

Predicted Functional Partners:

Smp_049550

0.901

Smp_035200.4

0.834

Smp_064860

0.783

Smp_069130.2

0.781

A0A3Q0KK62

0.760

A0A3Q0KHB7

0.756

A0A5K4F3U4

0.755

A0A5K4F1Y0

0.754

A0A5K4F5D3

0.754

HSP70_SCHMA

0.754

Your Current Organism:

Schistosoma mansoni

NCBI taxonomy Id: 6183
Other names: S. mansoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q0KHB7	A0A3Q0KK62	A0A3Q0KHB7	A0A3Q0KK62	Putative cyclophilin-like protein.	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	0.458
A0A3Q0KHB7	A0A5K4F1Y0	A0A3Q0KHB7	A0A5K4F1Y0	Putative cyclophilin-like protein.	Uncharacterized protein.	0.503
A0A3Q0KHB7	A0A5K4F3U4	A0A3Q0KHB7	A0A5K4F3U4	Putative cyclophilin-like protein.	Uncharacterized protein.	0.503
A0A3Q0KHB7	A0A5K4F5D3	A0A3Q0KHB7	A0A5K4F5D3	Putative cyclophilin-like protein.	Putative heat shock protein 70.	0.503
A0A3Q0KHB7	HSP70_SCHMA	A0A3Q0KHB7	P08418	Putative cyclophilin-like protein.	Heat shock 70 kDa protein homolog; Major immunogen in Schistosoma mansoni infections. Possibly plays an important role in parasite development and pathogenesis.	0.503
A0A3Q0KHB7	Smp_035200.4	A0A3Q0KHB7	G4V805	Putative cyclophilin-like protein.	Putative hsp40, subfamily A, members 1,2,4.	0.643
A0A3Q0KHB7	Smp_049550	A0A3Q0KHB7	G4V910	Putative cyclophilin-like protein.	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	0.643
A0A3Q0KHB7	Smp_064860	A0A3Q0KHB7	G4VPU9	Putative cyclophilin-like protein.	Putative heat shock protein 70 (Hsp70)-interacting protein.	0.973
A0A3Q0KHB7	Smp_069130.2	A0A3Q0KHB7	C4QFX9	Putative cyclophilin-like protein.	Heat shock protein 70 (Hsp70)-4, putative.	0.748
A0A3Q0KHB7	Smp_078800	A0A3Q0KHB7	G4VEK3	Putative cyclophilin-like protein.	Putative dnaj homolog subfamily B member.	0.756
A0A3Q0KK62	A0A3Q0KHB7	A0A3Q0KK62	A0A3Q0KHB7	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	Putative cyclophilin-like protein.	0.458
A0A3Q0KK62	A0A5K4F1Y0	A0A3Q0KK62	A0A5K4F1Y0	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.727
A0A3Q0KK62	A0A5K4F3U4	A0A3Q0KK62	A0A5K4F3U4	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.727
A0A3Q0KK62	A0A5K4F5D3	A0A3Q0KK62	A0A5K4F5D3	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	Putative heat shock protein 70.	0.727
A0A3Q0KK62	HSP70_SCHMA	A0A3Q0KK62	P08418	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	Heat shock 70 kDa protein homolog; Major immunogen in Schistosoma mansoni infections. Possibly plays an important role in parasite development and pathogenesis.	0.727
A0A3Q0KK62	Smp_035200.4	A0A3Q0KK62	G4V805	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	Putative hsp40, subfamily A, members 1,2,4.	0.878
A0A3Q0KK62	Smp_049550	A0A3Q0KK62	G4V910	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	0.798
A0A3Q0KK62	Smp_064860	A0A3Q0KK62	G4VPU9	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	Putative heat shock protein 70 (Hsp70)-interacting protein.	0.595
A0A3Q0KK62	Smp_069130.2	A0A3Q0KK62	C4QFX9	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	Heat shock protein 70 (Hsp70)-4, putative.	0.959
A0A3Q0KK62	Smp_078800	A0A3Q0KK62	G4VEK3	Putative heat shock protein 70 (Hsp70); Belongs to the heat shock protein 70 family.	Putative dnaj homolog subfamily B member.	0.760