STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_002550.2RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (143 aa)    
Predicted Functional Partners:
Smp_103470.1
Mago nashi protein homolog.
   
 0.999
Smp_091360
Mago-bind domain-containing protein.
    
 0.999
Smp_034190.1
Putative dead box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.999
Smp_031010
Putative dead box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.997
A0A3Q0KQJ0
Uncharacterized protein.
    
 0.996
A0A3Q0KLD1
Btz domain-containing protein.
   
 0.992
A0A3Q0KS65
Nuclear cap-binding protein subunit 2.
   
 0.991
Smp_070200
Putative ribonucleic acid binding protein S1.
   
 0.991
Smp_019190
Step II splicing factor slu7, putative.
   
 0.966
A0A3Q0KFU4
Smg-7 (Suppressor with morphological effect on genitalia protein 7), putative.
    
 0.963
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.