STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_079810RF_PROK_I domain-containing protein. (155 aa)    
Predicted Functional Partners:
Smp_086710
RF_PROK_I domain-containing protein.
   
 
 0.931
A0A3Q0KDF5
Putative n6-DNA-methyltransferase.
  
 
 0.921
A0A5K4EB06
Putative n6-DNA-methyltransferase.
  
 
 0.921
A0A5K4FCH8
Putative mitochondrial ribosomal protein L17.
  
 
 0.889
A0A3Q0KBS3
Putative 50s ribosomal protein L20.
  
 
 0.882
Smp_122490
Uncharacterized protein.
  
 
 0.880
Smp_074780
Putative 40s ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.880
A0A5K4FFJ3
Uncharacterized protein.
  
 
 0.878
Smp_066480
28S ribosomal protein S16, mitochondrial,putative.
  
 
 0.876
A0A5K4F8E7
Uncharacterized protein.
  
 
 0.872
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.