STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_053610Seryl-tRNA synthetase. (619 aa)    
Predicted Functional Partners:
Smp_074770
Uncharacterized protein.
   
 
 0.970
Smp_196910
Uncharacterized protein.
     
 0.931
Smp_015860
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.922
A0A3Q0KLH2
Tyrosine--tRNA ligase.
  
  
 0.915
A0A3Q0KGB5
Seryl-tRNA synthetase.
  
 
 
0.910
A0A5K4F4X7
Uncharacterized protein.
    
 
 0.901
A0A3Q0KJL0
Valine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.891
A0A3Q0KLP8
Isopentenyl-diphosphate delta-isomerase.
   
 
 0.890
Smp_070190
Putative gcn5.
   
 
 0.884
Smp_211170
Alpha(1,3)fucosyltransferase,putative.
    
 
 0.879
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.