STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_052760TFIIH basal transcription factor complex TTD-A subunit. (73 aa)    
Predicted Functional Partners:
A0A3Q0KID1
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.999
A0A5K4F918
Uncharacterized protein.
    
 0.996
A0A3Q0KSC1
Putative rad25/xp-B DNA repair helicase.
    
 0.992
A0A3Q0KFB3
Putative cak assembly factor.
    
 0.962
A0A3Q0KML5
Putative btf.
    
 0.956
A0A5K4EN31
Putative btf.
   
 0.956
A0A5K4EH41
Transcription initiation factor IIE subunit beta.
   
  0.941
A0A3Q0KIA0
Transcription initiation factor IIE subunit beta.
    
  0.940
A0A3Q0KFB2
Putative cak assembly factor.
    
 0.934
A0A3Q0KCC8
Uncharacterized protein.
    
 0.921
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
Server load: low (20%) [HD]