STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_134230Putative geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (338 aa)    
Predicted Functional Partners:
Smp_070710
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
   
 0.980
A0A3Q0KT25
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.968
A0A3Q0KFJ7
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.951
A0A3Q0KEM7
Uncharacterized protein.
  
 
 0.946
A0A5K4FCZ0
Protein farnesyltransferase subunit beta.
   
 0.944
A0A5K4F241
Uncharacterized protein.
     
 0.942
A0A5K4F256
Uncharacterized protein.
   
 
0.934
A0A3Q0KLP8
Isopentenyl-diphosphate delta-isomerase.
     
  0.900
A0A5K4EZL4
Uncharacterized protein.
  
 
 0.780
Smp_059360
Pre-mRNA processing factor, putative.
 
 
    0.729
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.