STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_142300Putative polypyrimidine tract binding protein. (584 aa)    
Predicted Functional Partners:
Smp_149700
Heterogeneous nuclear ribonucleoprotein l (Hnrnp l), putative.
  
0.631
Smp_051530
Heterogeneous nuclear ribonucleoprotein l (Hnrnp l), putative.
  
0.629
A0A3Q0KBW8
Heterogeneous nuclear ribonucleoprotein l (Hnrnp l), putative.
  
0.619
A0A3Q0KS65
Nuclear cap-binding protein subunit 2.
    
 0.610
A0A5K4F5C0
Splicing factor Prp8, putative.
   
 
 0.582
A0A3Q0KU69
Putative heterogeneous nuclear ribonucleoprotein (Hnrnp).
   
 0.581
Smp_113620.1
Putative serine/arginine rich splicing factor.
   
 0.568
Smp_099170
DNA-directed rna polymerase II subunit,putative.
   
 
  0.537
A0A3Q0KJZ9
WD-repeat protein, putative.
   
  
 0.535
A0A3Q0KDZ2
Putative cap binding protein.
   
 0.523
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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