STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_097800.1Y box binding protein, putative. (217 aa)    
Predicted Functional Partners:
A0A3Q0KVF3
DEAD box ATP-dependent RNA helicase, putative; Belongs to the DEAD box helicase family.
  
 0.929
Smp_068420
Small nuclear ribonucleoprotein Sm D3.
   
 0.892
Smp_065580.3
Putative heterogeneous nuclear ribonucleoprotein k.
   
 0.854
Smp_024140.4
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.777
A0A5K4F8M9
Uncharacterized protein.
   
 
 0.776
Smp_000240.2
Fusion; RNA binding protein, putative.
   
 0.757
A0A3Q0KUZ7
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.751
A0A5K4FCX7
Uncharacterized protein.
   
 0.744
Smp_060910
Putative small nuclear ribonucleoprotein f (Snrnp-f).
    
  0.734
A0A5K4FBN8
Uncharacterized protein.
   
 
 0.703
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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