STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DC041_0000207Nuclear pore complex protein Nup62. (700 aa)    
Predicted Functional Partners:
DC041_0001600
Nuclear pore complex protein Nup54.
   
 0.997
DC041_0011768
Nuclear pore complex protein Nup205.
   
 0.988
DC041_0006956
Nuclear pore protein.
   
 0.988
DC041_0007408
Uncharacterized protein.
   
 0.986
DC041_0005922
Nuclear pore complex protein Nup133.
   
 0.986
DC041_0004077
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.985
DC041_0003887
Nuclear pore complex protein Nup88.
    
 0.980
DC041_0004706
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
   
 0.977
DC041_0010670
Nuclear pore complex protein Nup98-Nup96.
   
 0.967
DC041_0002820
RRM domain-containing protein.
   
 0.967
Your Current Organism:
Schistosoma bovis
NCBI taxonomy Id: 6184
Other names: S. bovis
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