Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MS3_01440 | MS3_01593 | A0A094ZFR3 | A0A094ZKI6 | Protein HID1. | Ubiquitin carboxyl-terminal hydrolase 48; Belongs to the peptidase C19 family. | 0.552 |
MS3_01440 | MS3_03341 | A0A094ZFR3 | A0A094ZM32 | Protein HID1. | Nuclear RNA export factor 1. | 0.459 |
MS3_01440 | MS3_03551 | A0A094ZFR3 | A0A094ZKZ3 | Protein HID1. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.510 |
MS3_01440 | MS3_03659 | A0A094ZFR3 | A0A094ZQU3 | Protein HID1. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. | 0.556 |
MS3_01440 | MS3_04156 | A0A094ZFR3 | A0A094ZMI5 | Protein HID1. | Nucleoporin_C domain-containing protein. | 0.513 |
MS3_01440 | MS3_04405 | A0A094ZFR3 | A0A094ZN65 | Protein HID1. | Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. | 0.836 |
MS3_01440 | MS3_07794 | A0A094ZFR3 | A0A095AXI2 | Protein HID1. | Uncharacterized protein. | 0.642 |
MS3_01440 | MS3_08367 | A0A094ZFR3 | A0A095CBN7 | Protein HID1. | Nuclear pore complex protein Nup54. | 0.512 |
MS3_01440 | MS3_09685 | A0A094ZFR3 | A0A095B223 | Protein HID1. | Dymeclin. | 0.533 |
MS3_01440 | MS3_09862 | A0A094ZFR3 | A0A095A6S8 | Protein HID1. | Proliferation-associated protein 2G4. | 0.456 |
MS3_01593 | MS3_01440 | A0A094ZKI6 | A0A094ZFR3 | Ubiquitin carboxyl-terminal hydrolase 48; Belongs to the peptidase C19 family. | Protein HID1. | 0.552 |
MS3_03341 | MS3_01440 | A0A094ZM32 | A0A094ZFR3 | Nuclear RNA export factor 1. | Protein HID1. | 0.459 |
MS3_03341 | MS3_03551 | A0A094ZM32 | A0A094ZKZ3 | Nuclear RNA export factor 1. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.931 |
MS3_03341 | MS3_04156 | A0A094ZM32 | A0A094ZMI5 | Nuclear RNA export factor 1. | Nucleoporin_C domain-containing protein. | 0.849 |
MS3_03341 | MS3_07794 | A0A094ZM32 | A0A095AXI2 | Nuclear RNA export factor 1. | Uncharacterized protein. | 0.891 |
MS3_03341 | MS3_08367 | A0A094ZM32 | A0A095CBN7 | Nuclear RNA export factor 1. | Nuclear pore complex protein Nup54. | 0.872 |
MS3_03341 | MS3_09862 | A0A094ZM32 | A0A095A6S8 | Nuclear RNA export factor 1. | Proliferation-associated protein 2G4. | 0.893 |
MS3_03551 | MS3_01440 | A0A094ZKZ3 | A0A094ZFR3 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Protein HID1. | 0.510 |
MS3_03551 | MS3_03341 | A0A094ZKZ3 | A0A094ZM32 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Nuclear RNA export factor 1. | 0.931 |
MS3_03551 | MS3_04156 | A0A094ZKZ3 | A0A094ZMI5 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Nucleoporin_C domain-containing protein. | 0.999 |
page 1 of 3