Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MS3_00364 | MS3_00934 | A0A094ZDA2 | A0A094ZG88 | NEDD8. | F-box domain-containing protein. | 0.626 |
MS3_00364 | MS3_01413 | A0A094ZDA2 | A0A095BW92 | NEDD8. | NEDD8-activating enzyme E1 regulatory subunit. | 0.986 |
MS3_00364 | MS3_02076 | A0A094ZDA2 | A0A094ZLQ3 | NEDD8. | Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. | 0.936 |
MS3_00364 | MS3_02506 | A0A094ZDA2 | A0A094ZIF3 | NEDD8. | Cullin-1; Belongs to the cullin family. | 0.992 |
MS3_00364 | MS3_02947 | A0A094ZDA2 | A0A094ZL57 | NEDD8. | RING-box protein 1A. | 0.985 |
MS3_00364 | MS3_04896 | A0A094ZDA2 | A0A094ZPG0 | NEDD8. | S-phase kinase-associated protein 1; Belongs to the SKP1 family. | 0.959 |
MS3_00364 | MS3_05989 | A0A094ZDA2 | A0A095C6H3 | NEDD8. | NEDD8-activating enzyme E1 catalytic subunit. | 0.993 |
MS3_00364 | MS3_08348 | A0A094ZDA2 | A0A095AYT5 | NEDD8. | Cullin-3; Belongs to the cullin family. | 0.970 |
MS3_00364 | MS3_08364 | A0A094ZDA2 | A0A095A2Y3 | NEDD8. | Cullin-associated NEDD8-dissociated protein 1. | 0.761 |
MS3_00364 | MS3_08365 | A0A094ZDA2 | A0A094ZY85 | NEDD8. | Cullin-associated NEDD8-dissociated protein 1. | 0.761 |
MS3_00934 | MS3_00364 | A0A094ZG88 | A0A094ZDA2 | F-box domain-containing protein. | NEDD8. | 0.626 |
MS3_00934 | MS3_01413 | A0A094ZG88 | A0A095BW92 | F-box domain-containing protein. | NEDD8-activating enzyme E1 regulatory subunit. | 0.617 |
MS3_00934 | MS3_02076 | A0A094ZG88 | A0A094ZLQ3 | F-box domain-containing protein. | Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. | 0.593 |
MS3_00934 | MS3_02506 | A0A094ZG88 | A0A094ZIF3 | F-box domain-containing protein. | Cullin-1; Belongs to the cullin family. | 0.853 |
MS3_00934 | MS3_02947 | A0A094ZG88 | A0A094ZL57 | F-box domain-containing protein. | RING-box protein 1A. | 0.661 |
MS3_00934 | MS3_04896 | A0A094ZG88 | A0A094ZPG0 | F-box domain-containing protein. | S-phase kinase-associated protein 1; Belongs to the SKP1 family. | 0.880 |
MS3_00934 | MS3_05989 | A0A094ZG88 | A0A095C6H3 | F-box domain-containing protein. | NEDD8-activating enzyme E1 catalytic subunit. | 0.616 |
MS3_00934 | MS3_08348 | A0A094ZG88 | A0A095AYT5 | F-box domain-containing protein. | Cullin-3; Belongs to the cullin family. | 0.692 |
MS3_00934 | MS3_08364 | A0A094ZG88 | A0A095A2Y3 | F-box domain-containing protein. | Cullin-associated NEDD8-dissociated protein 1. | 0.596 |
MS3_00934 | MS3_08365 | A0A094ZG88 | A0A094ZY85 | F-box domain-containing protein. | Cullin-associated NEDD8-dissociated protein 1. | 0.596 |
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