STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS3_01608RNA polymerase II-associated protein 1. (1563 aa)    
Predicted Functional Partners:
MS3_01044
GPN-loop GTPase 2.
    
 
 0.881
MS3_07142
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
    
 
 0.739
MS3_05742
GPN-loop GTPase 3.
      
 0.668
MS3_02381
DNA-directed RNA polymerase II subunit RPB3.
    
 
 0.652
MS3_05003
Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2.
      
 0.577
MS3_07862
RNA polymerase II-associated protein 3.
      
 0.577
MS3_04487
RuvB-like helicase; Belongs to the RuvB family.
      
 0.525
MS3_06925
DNA-directed RNA polymerases I and III subunit RPAC1.
    
 
 0.446
MS3_01632
Putative complex I intermediate-associated protein 30, mitochondrial.
      
 0.404
Your Current Organism:
Schistosoma haematobium
NCBI taxonomy Id: 6185
Other names: S. haematobium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.