MS3_02284 protein (Schistosoma haematobium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MS3_02284

Meckel syndrome type 1 protein-like protein. (255 aa)

Predicted Functional Partners:

MS3_00976

0.901

MS3_04226

0.876

MS3_11332

0.852

MS3_08196

0.852

MS3_02861

0.795

MS3_06623

0.745

MS3_10287

0.745

MS3_06617

0.745

MS3_08752

0.726

MS3_08750

0.726

Your Current Organism:

Schistosoma haematobium

NCBI taxonomy Id: 6185
Other names: S. haematobium

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MS3_00976	MS3_02284	A0A095AG41	A0A094ZHT9	B9 domain-containing protein 2.	Meckel syndrome type 1 protein-like protein.	0.901
MS3_00976	MS3_02861	A0A095AG41	A0A095BZK8	B9 domain-containing protein 2.	Tectonic-2.	0.608
MS3_00976	MS3_04226	A0A095AG41	A0A094ZMP6	B9 domain-containing protein 2.	Meckelin.	0.866
MS3_00976	MS3_06617	A0A095AG41	A0A095AUR8	B9 domain-containing protein 2.	Coiled-coil and C2 domain-containing protein 2A.	0.752
MS3_00976	MS3_06623	A0A095AG41	A0A094ZTY1	B9 domain-containing protein 2.	Coiled-coil and C2 domain-containing protein 2A.	0.752
MS3_00976	MS3_08196	A0A095AG41	A0A095A2M0	B9 domain-containing protein 2.	B9 domain-containing protein 1.	0.936
MS3_00976	MS3_08750	A0A095AG41	A0A095CCL5	B9 domain-containing protein 2.	Jouberin.	0.718
MS3_00976	MS3_08752	A0A095AG41	A0A095A0M1	B9 domain-containing protein 2.	Jouberin.	0.718
MS3_00976	MS3_10287	A0A095AG41	A0A095A4J8	B9 domain-containing protein 2.	Uncharacterized protein.	0.752
MS3_00976	MS3_11332	A0A095AG41	A0A094ZG07	B9 domain-containing protein 2.	B9 domain-containing protein 1.	0.940
MS3_02284	MS3_00976	A0A094ZHT9	A0A095AG41	Meckel syndrome type 1 protein-like protein.	B9 domain-containing protein 2.	0.901
MS3_02284	MS3_02861	A0A094ZHT9	A0A095BZK8	Meckel syndrome type 1 protein-like protein.	Tectonic-2.	0.795
MS3_02284	MS3_04226	A0A094ZHT9	A0A094ZMP6	Meckel syndrome type 1 protein-like protein.	Meckelin.	0.876
MS3_02284	MS3_06617	A0A094ZHT9	A0A095AUR8	Meckel syndrome type 1 protein-like protein.	Coiled-coil and C2 domain-containing protein 2A.	0.745
MS3_02284	MS3_06623	A0A094ZHT9	A0A094ZTY1	Meckel syndrome type 1 protein-like protein.	Coiled-coil and C2 domain-containing protein 2A.	0.745
MS3_02284	MS3_08196	A0A094ZHT9	A0A095A2M0	Meckel syndrome type 1 protein-like protein.	B9 domain-containing protein 1.	0.852
MS3_02284	MS3_08750	A0A094ZHT9	A0A095CCL5	Meckel syndrome type 1 protein-like protein.	Jouberin.	0.726
MS3_02284	MS3_08752	A0A094ZHT9	A0A095A0M1	Meckel syndrome type 1 protein-like protein.	Jouberin.	0.726
MS3_02284	MS3_10287	A0A094ZHT9	A0A095A4J8	Meckel syndrome type 1 protein-like protein.	Uncharacterized protein.	0.745
MS3_02284	MS3_11332	A0A094ZHT9	A0A094ZG07	Meckel syndrome type 1 protein-like protein.	B9 domain-containing protein 1.	0.852