STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS3_03036Putative ATP-dependent RNA helicase DDX52. (522 aa)    
Predicted Functional Partners:
MS3_05625
Something about silencing protein 10.
   
 0.997
MS3_00920
KRR1 small subunit processome component-like protein.
   
 0.993
MS3_09038
Nucleolar protein 6.
   
 0.988
MS3_04861
Protein RRP5-like protein.
   
 0.985
MS3_05457
Nucleolar protein 14.
   
 
 0.985
MS3_02603
Putative ATP-dependent RNA helicase DDX56.
  
0.978
MS3_00898
ATP-dependent RNA helicase DDX24; Belongs to the DEAD box helicase family.
  
0.975
MS3_00369
RNA-binding protein 34.
   
  
 0.975
MS3_08787
WD repeat-containing protein 46.
   
 
 0.971
MS3_11534
Uncharacterized protein.
   
 0.971
Your Current Organism:
Schistosoma haematobium
NCBI taxonomy Id: 6185
Other names: S. haematobium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.