STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS3_03644Brain tumor protein. (210 aa)    
Predicted Functional Partners:
MS3_03637
Tripartite motif-containing protein 45.
 
      0.880
MS3_09276
Polyubiquitin-C.
   
 0.768
MS3_09691
Ubiquitin-40S ribosomal protein S27a.
    
 0.734
MS3_08258
Ubiquitin-conjugating enzyme E2 2.
  
 0.597
MS3_09382
Uncharacterized protein.
    
 0.546
MS3_10278
Uncharacterized protein.
    
 0.546
MS3_06008
Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.544
MS3_09117
Ubiquitin-conjugating enzyme E2-17 kDa.
   
 0.544
MS3_07298
annotation not available
    
  0.543
MS3_06136
ATP-dependent RNA helicase abstrakt; Belongs to the DEAD box helicase family.
    
 0.510
Your Current Organism:
Schistosoma haematobium
NCBI taxonomy Id: 6185
Other names: S. haematobium
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