Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MS3_04095 | MS3_06114 | A0A095ANL4 | A0A094ZSN6 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | Outer dense fiber protein 3-B. | 0.444 |
MS3_06114 | MS3_04095 | A0A094ZSN6 | A0A095ANL4 | Outer dense fiber protein 3-B. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.444 |
MS3_06114 | MS3_06914 | A0A094ZSN6 | A0A094ZUH8 | Outer dense fiber protein 3-B. | Proteasome subunit beta; Belongs to the peptidase T1B family. | 0.437 |
MS3_06114 | MS3_07449 | A0A094ZSN6 | A0A094ZVU8 | Outer dense fiber protein 3-B. | Parkin coregulated gene protein-like protein. | 0.467 |
MS3_06914 | MS3_06114 | A0A094ZUH8 | A0A094ZSN6 | Proteasome subunit beta; Belongs to the peptidase T1B family. | Outer dense fiber protein 3-B. | 0.437 |
MS3_07449 | MS3_06114 | A0A094ZVU8 | A0A094ZSN6 | Parkin coregulated gene protein-like protein. | Outer dense fiber protein 3-B. | 0.467 |