Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MS3_04474Uncharacterized protein. (381 aa)    
Predicted Functional Partners:
MS3_05997
Breast cancer type 1 susceptibility protein-like protein.
    
 0.855
MS3_09691
Ubiquitin-40S ribosomal protein S27a.
    
  0.785
MS3_09276
Polyubiquitin-C.
    
  0.749
MS3_11557
Uncharacterized protein.
    
 0.745
MS3_05130
BRCT domain-containing protein.
    
 0.651
MS3_06732
Ubiquitin-60S ribosomal protein L40.
    
  0.635
MS3_11433
Uncharacterized protein.
    
 0.620
MS3_09708
Uncharacterized protein.
    
 0.620
MS3_05871
FHA domain-containing protein.
    
 0.620
MS3_04602
Small ubiquitin-related modifier.
    
  0.595
Your Current Organism:
Schistosoma haematobium
NCBI taxonomy Id: 6185
Other names: S. haematobium
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