STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MS3_04498Sorting nexin-2. (451 aa)    
Predicted Functional Partners:
MS3_08586
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.988
MS3_09187
Vacuolar protein sorting-associated protein 26.
   
 
 0.984
MS3_09766
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.982
MS3_09284
Cyclin-G-associated kinase.
   
 0.955
MS3_02693
Sorting nexin-33.
   
 0.901
MS3_05910
Ras-related protein Rab-5C.
   
 0.895
MS3_07313
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 
 0.893
MS3_09602
Hepatocyte growth factor-regulated tyrosine kinase substrate.
   
 
 0.866
MS3_02460
Sorting nexin-3.
   
 
 0.844
MS3_03082
TBC1 domain family member 5.
    
 
 0.795
Your Current Organism:
Schistosoma haematobium
NCBI taxonomy Id: 6185
Other names: S. haematobium
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