STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS3_06136ATP-dependent RNA helicase abstrakt; Belongs to the DEAD box helicase family. (616 aa)    
Predicted Functional Partners:
MS3_05272
Peptidylprolyl isomerase domain and WD repeat-containing protein 1.
   
 0.833
MS3_08819
UPF0396 protein.
    
  0.787
MS3_01412
Bifunctional glutamate/proline--tRNA ligase.
      
 0.714
MS3_02236
ATP-dependent RNA helicase A.
    
 0.685
MS3_07944
Spliceosome RNA helicase DDX39B.
  
0.667
MS3_01013
ER membrane protein complex subunit 1.
      
 0.654
MS3_07117
Pre-mRNA-processing factor 17.
    
  0.648
MS3_04234
Polymerase delta-interacting protein 3.
   
  0.647
MS3_07222
Serine/arginine repetitive matrix protein 1.
    
  0.643
MS3_04179
THO complex subunit 4-A.
   
  0.642
Your Current Organism:
Schistosoma haematobium
NCBI taxonomy Id: 6185
Other names: S. haematobium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.