Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED19 | MS3_05768 | A0A095AR39 | A0A094ZW88 | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | U4/U6 small nuclear ribonucleoprotein Prp3. | 0.649 |
MED19 | MS3_08453 | A0A095AR39 | A0A095A350 | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Chloride channel protein. | 0.624 |
MED19 | MS3_09439 | A0A095AR39 | A0A095B1F4 | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Glucose-6-phosphate 1-dehydrogenase. | 0.552 |
MS3_00150 | MS3_02199 | A0A094ZCR9 | A0A095AIY3 | Nesprin-1. | Integrin alpha-7. | 0.718 |
MS3_00150 | MS3_08453 | A0A094ZCR9 | A0A095A350 | Nesprin-1. | Chloride channel protein. | 0.608 |
MS3_02199 | MS3_00150 | A0A095AIY3 | A0A094ZCR9 | Integrin alpha-7. | Nesprin-1. | 0.718 |
MS3_02199 | MS3_08453 | A0A095AIY3 | A0A095A350 | Integrin alpha-7. | Chloride channel protein. | 0.680 |
MS3_03853 | MS3_08453 | A0A095C1X3 | A0A095A350 | Uncharacterized protein. | Chloride channel protein. | 0.983 |
MS3_04118 | MS3_08453 | A0A094ZMG4 | A0A095A350 | Methylosome subunit pICln. | Chloride channel protein. | 0.567 |
MS3_05671 | MS3_08453 | A0A095ASG5 | A0A095A350 | Sodium/hydrogen exchanger 9. | Chloride channel protein. | 0.552 |
MS3_05768 | MED19 | A0A094ZW88 | A0A095AR39 | U4/U6 small nuclear ribonucleoprotein Prp3. | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.649 |
MS3_05768 | MS3_08453 | A0A094ZW88 | A0A095A350 | U4/U6 small nuclear ribonucleoprotein Prp3. | Chloride channel protein. | 0.582 |
MS3_05768 | MS3_09439 | A0A094ZW88 | A0A095B1F4 | U4/U6 small nuclear ribonucleoprotein Prp3. | Glucose-6-phosphate 1-dehydrogenase. | 0.547 |
MS3_06593 | MS3_08453 | A0A094ZYJ4 | A0A095A350 | Serine/threonine-protein kinase LATS1. | Chloride channel protein. | 0.569 |
MS3_08453 | MED19 | A0A095A350 | A0A095AR39 | Chloride channel protein. | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.624 |
MS3_08453 | MS3_00150 | A0A095A350 | A0A094ZCR9 | Chloride channel protein. | Nesprin-1. | 0.608 |
MS3_08453 | MS3_02199 | A0A095A350 | A0A095AIY3 | Chloride channel protein. | Integrin alpha-7. | 0.680 |
MS3_08453 | MS3_03853 | A0A095A350 | A0A095C1X3 | Chloride channel protein. | Uncharacterized protein. | 0.983 |
MS3_08453 | MS3_04118 | A0A095A350 | A0A094ZMG4 | Chloride channel protein. | Methylosome subunit pICln. | 0.567 |
MS3_08453 | MS3_05671 | A0A095A350 | A0A095ASG5 | Chloride channel protein. | Sodium/hydrogen exchanger 9. | 0.552 |
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