STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS3_08453Chloride channel protein. (646 aa)    
Predicted Functional Partners:
MS3_03853
Uncharacterized protein.
    
 0.983
MS3_02199
Integrin alpha-7.
      
 0.680
MED19
Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.624
MS3_00150
Nesprin-1.
      
 0.608
MS3_05768
U4/U6 small nuclear ribonucleoprotein Prp3.
      
 0.582
MS3_09439
Glucose-6-phosphate 1-dehydrogenase.
  
  
 0.575
MS3_06593
Serine/threonine-protein kinase LATS1.
    
 0.569
MS3_04118
Methylosome subunit pICln.
      
 0.567
MS3_05671
Sodium/hydrogen exchanger 9.
  
  
 0.552
MS3_10728
NADH-ubiquinone oxidoreductase chain 5.
     
 0.546
Your Current Organism:
Schistosoma haematobium
NCBI taxonomy Id: 6185
Other names: S. haematobium
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