STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS3_01826Ubiquitin carboxyl-terminal hydrolase. (654 aa)    
Predicted Functional Partners:
MS3_03252
Tyrosine--tRNA ligase.
      
 0.714
MS3_09276
Polyubiquitin-C.
    
 0.629
MS3_01749
Putative aminopeptidase W07G4.4.
    
 0.623
MS3_09980
Uncharacterized protein.
    
 0.623
MS3_01287
Replication factor C subunit 5.
    
 0.619
MS3_10307
28S ribosomal protein S9, mitochondrial.
   
 
 0.611
MS3_01230
ANK_REP_REGION domain-containing protein.
    
 0.602
MS3_05090
39S ribosomal protein L3, mitochondrial.
   
 
 0.600
MS3_10313
39S ribosomal protein L11, mitochondrial.
   
 
 0.598
MS3_01938
Proliferating cell nuclear antigen.
   
  0.592
Your Current Organism:
Schistosoma haematobium
NCBI taxonomy Id: 6185
Other names: S. haematobium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.