STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS3_07784Alkylated DNA repair protein alkB 8. (154 aa)    
Predicted Functional Partners:
MS3_03556
tRNA methyltransferase 112-like protein.
   
 0.997
MS3_04316
tRNA (Guanine(10)-N2)-methyltransferase-like protein.
   
 
 0.755
MS3_02988
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.732
MS3_05916
Cytoplasmic tRNA 2-thiolation protein 1.
   
 
 0.731
MS3_05221
Alkylated DNA repair protein alkB 1.
   
  
 0.726
MS3_07204
Alpha-ketoglutarate-dependent dioxygenase alkB 4.
   
  
 0.702
MS3_05450
Adenylyltransferase and sulfurtransferase MOCS3.
   
  
 0.683
MS3_11144
Alkylated DNA repair protein alkB 8.
  
  
0.680
MS3_06607
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.645
MS3_06028
Protein arginine N-methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 0.627
Your Current Organism:
Schistosoma haematobium
NCBI taxonomy Id: 6185
Other names: S. haematobium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.