STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS3_01838E3 ubiquitin-protein ligase PDZRN3. (314 aa)    
Predicted Functional Partners:
MS3_05299
E3 ubiquitin-protein ligase mib1.
    
 0.982
MS3_01613
Baculoviral IAP repeat-containing protein 6.
   
 0.889
MS3_01617
Baculoviral IAP repeat-containing protein 6.
   
 0.889
MS3_01230
ANK_REP_REGION domain-containing protein.
   
 0.874
MS3_09382
Uncharacterized protein.
    
 0.741
MS3_10278
Uncharacterized protein.
    
 0.741
MS3_09691
Ubiquitin-40S ribosomal protein S27a.
    
 0.735
MS3_06732
Ubiquitin-60S ribosomal protein L40.
    
  0.682
MS3_02795
Deoxyribonuclease-1-like 2.
    
 0.570
MS3_08448
Transcription initiation factor TFIID subunit 3.
   
    0.566
Your Current Organism:
Schistosoma haematobium
NCBI taxonomy Id: 6185
Other names: S. haematobium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.