Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BARD1 | BRCA1 | ENSNLEP00000008789 | ENSNLEP00000042201 | BRCA1 associated RING domain 1. | BRCA1 DNA repair associated. | 0.999 |
BARD1 | BRCA2 | ENSNLEP00000008789 | ENSNLEP00000001277 | BRCA1 associated RING domain 1. | BRCA2 DNA repair associated. | 0.990 |
BARD1 | BRIP1 | ENSNLEP00000008789 | ENSNLEP00000000533 | BRCA1 associated RING domain 1. | BRCA1 interacting protein C-terminal helicase 1. | 0.997 |
BARD1 | G1QJN0_NOMLE | ENSNLEP00000008789 | ENSNLEP00000001125 | BRCA1 associated RING domain 1. | Uncharacterized protein. | 0.524 |
BARD1 | LOC100597058 | ENSNLEP00000008789 | ENSNLEP00000026546 | BRCA1 associated RING domain 1. | MutL_C domain-containing protein. | 0.524 |
BARD1 | MLH1 | ENSNLEP00000008789 | ENSNLEP00000006040 | BRCA1 associated RING domain 1. | MutL homolog 1. | 0.645 |
BARD1 | MRE11 | ENSNLEP00000008789 | ENSNLEP00000030208 | BRCA1 associated RING domain 1. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.997 |
BARD1 | NBN | ENSNLEP00000008789 | ENSNLEP00000029664 | BRCA1 associated RING domain 1. | Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. | 0.996 |
BARD1 | PALB2 | ENSNLEP00000008789 | ENSNLEP00000014633 | BRCA1 associated RING domain 1. | Partner and localizer of BRCA2. | 0.964 |
BARD1 | TOPBP1 | ENSNLEP00000008789 | ENSNLEP00000004327 | BRCA1 associated RING domain 1. | DNA topoisomerase II binding protein 1. | 0.996 |
BRCA1 | BARD1 | ENSNLEP00000042201 | ENSNLEP00000008789 | BRCA1 DNA repair associated. | BRCA1 associated RING domain 1. | 0.999 |
BRCA1 | BRCA2 | ENSNLEP00000042201 | ENSNLEP00000001277 | BRCA1 DNA repair associated. | BRCA2 DNA repair associated. | 0.999 |
BRCA1 | BRIP1 | ENSNLEP00000042201 | ENSNLEP00000000533 | BRCA1 DNA repair associated. | BRCA1 interacting protein C-terminal helicase 1. | 0.999 |
BRCA1 | G1QJN0_NOMLE | ENSNLEP00000042201 | ENSNLEP00000001125 | BRCA1 DNA repair associated. | Uncharacterized protein. | 0.742 |
BRCA1 | LOC100597058 | ENSNLEP00000042201 | ENSNLEP00000026546 | BRCA1 DNA repair associated. | MutL_C domain-containing protein. | 0.742 |
BRCA1 | MLH1 | ENSNLEP00000042201 | ENSNLEP00000006040 | BRCA1 DNA repair associated. | MutL homolog 1. | 0.969 |
BRCA1 | MRE11 | ENSNLEP00000042201 | ENSNLEP00000030208 | BRCA1 DNA repair associated. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.998 |
BRCA1 | NBN | ENSNLEP00000042201 | ENSNLEP00000029664 | BRCA1 DNA repair associated. | Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. | 0.983 |
BRCA1 | PALB2 | ENSNLEP00000042201 | ENSNLEP00000014633 | BRCA1 DNA repair associated. | Partner and localizer of BRCA2. | 0.999 |
BRCA1 | TOPBP1 | ENSNLEP00000042201 | ENSNLEP00000004327 | BRCA1 DNA repair associated. | DNA topoisomerase II binding protein 1. | 0.998 |
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