STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE6BPhosphodiesterase 6B. (788 aa)    
Predicted Functional Partners:
PDE6A
Phosphodiesterase.
  
  
0.953
GNAT1
G protein subunit alpha transducin 1.
   
 0.860
PRPH2
Peripherin 2.
   
  
 0.792
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
   
 0.773
RHO
Rhodopsin.
   
  
 0.750
GNAT2
G protein subunit alpha transducin 2.
   
 0.746
CNGB1
Cyclic nucleotide gated channel subunit beta 1.
   
 0.722
RD3
Retinal degeneration 3, GUCY2D regulator.
    
 
 0.714
GUCA1B
Guanylate cyclase activator 1B.
   
  
 0.670
RPE65
Retinoid isomerohydrolase RPE65.
   
  
 0.665
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.