Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MATN1Matrilin 1. (496 aa)    
Predicted Functional Partners:
MATN4
VWFA domain-containing protein.
   
 0.652
SNX19
Sorting nexin 19.
    
 
 0.641
TBL3
Transducin beta like 3.
    
 
 0.543
CHAD
Chondroadherin.
    
 0.536
MIA
SH3 domain-containing protein.
      
 0.518
TBX5
T-box transcription factor 5.
     
 0.508
COL9A1
Collagen type IX alpha 1 chain.
   
 0.508
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
 
 0.503
EXT1
Exostosin glycosyltransferase 1; Belongs to the glycosyltransferase 47 family.
      
 0.501
COL2A1
Collagen type II alpha 1 chain.
   
 0.495
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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