Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IRX5Iroquois homeobox 5. (483 aa)    
Predicted Functional Partners:
IRX3
Iroquois homeobox 3.
   
  
 0.916
KCND2
Potassium voltage-gated channel subfamily D member 2; Belongs to the potassium channel family.
    
 
 0.649
NKX3-1
NK3 homeobox 1.
    
 
 0.529
WNT9B
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
  
 0.527
SMYD1
SET and MYND domain containing 1.
    
 0.524
TSHZ3
Teashirt zinc finger homeobox 3.
   
 0.502
SRF
Serum response factor.
   
 
 0.501
G1S044_NOMLE
Uncharacterized protein.
   
 
 0.475
FOXN4
Forkhead box N4.
   
 
 0.466
HAND2
Heart and neural crest derivatives expressed 2.
    
 
 0.464
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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