Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP23BShKT domain-containing protein. (280 aa)    
Predicted Functional Partners:
CDK13
Cyclin dependent kinase 13.
   
  
 0.681
CDK11B
Protein kinase domain-containing protein.
      
 0.582
HPX
Hemopexin.
      
 0.528
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.498
TIMP4
TIMP metallopeptidase inhibitor 4.
    
 0.479
SPP1
Secreted phosphoprotein 1.
    
 0.478
CAPN7
Calpain 7; Belongs to the peptidase C2 family.
      
 0.473
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
    
 0.465
PARD6A
Par-6 family cell polarity regulator alpha.
      
 0.454
TIMP1
NTR domain-containing protein.
    
 0.443
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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