STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NONONon-POU domain containing octamer binding. (463 aa)    
Predicted Functional Partners:
SFPQ
RRM domain-containing protein.
   
 
0.951
PSPC1
Paraspeckle component 1.
    
 
0.881
ILF3
Interleukin enhancer binding factor 3.
   
 
 0.549
PTBP1
Polypyrimidine tract binding protein 1.
   
 
0.544
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 
 0.501
FUS
FUS RNA binding protein.
   
 
 0.496
HNRNPM
HnRNP_M domain-containing protein.
   
 
 0.464
CPSF6
Cleavage and polyadenylation specific factor 6.
   
 
 0.459
SNRPA
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.445
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.441
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.