STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLN3Battenin. (384 aa)    
Predicted Functional Partners:
CLN5
CLN5 intracellular trafficking protein.
    
 
 0.874
PPT1
Palmitoyl-protein thioesterase 1.
    
 
 0.799
CLN6
CLN6 transmembrane ER protein.
      
 0.789
CLN8
CLN8 transmembrane ER and ERGIC protein.
      
 0.773
MFSD8
Major facilitator superfamily domain containing 8.
    
 
 0.738
DNAJC5
DnaJ heat shock protein family (Hsp40) member C5.
   
 
 0.704
G1S6Q6_NOMLE
Peptidase S53 domain-containing protein.
      
 0.696
KCNIP3
Uncharacterized protein.
    
 
 0.695
KCTD7
Potassium channel tetramerization domain containing 7.
      
 0.546
ATG7
Autophagy related 7.
      
 0.534
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.