Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCERG1LUncharacterized protein. (367 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
    
 0.895
MFAP1
Microfibril associated protein 1.
   
 0.890
RBM25
RNA binding motif protein 25.
   
 
 0.882
RBM22
Uncharacterized protein.
   
 0.858
DDX46
DEAD-box helicase 46.
   
 0.855
G1RE42_NOMLE
U1-type domain-containing protein.
    
  0.849
PRPF4B
Pre-mRNA processing factor 4B.
   
 0.803
CWC15
CWC15 spliceosome associated protein homolog.
   
 0.797
U2SURP
U2 snRNP associated SURP domain containing.
   
   0.784
PRPF38A
PRP38_assoc domain-containing protein.
   
 0.765
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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