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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF38BUncharacterized protein. (547 aa)    
Predicted Functional Partners:
PRPF38A
PRP38_assoc domain-containing protein.
     
 
0.900
RBM25
RNA binding motif protein 25.
   
  
 0.618
ENSNLEP00000025767
Uncharacterized protein.
    
   0.603
ENSNLEP00000034619
Ubiquitin-like domain-containing protein.
    
   0.603
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.584
PNN
Pinin, desmosome associated protein.
   
    0.582
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.560
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
 0.467
PRPF4B
Pre-mRNA processing factor 4B.
   
    0.463
PPIG
Peptidylprolyl isomerase G.
   
   0.421
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.